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Pseudotime Trajectory Viz

作者 AIpoch · GitHub ↗ · v1.0.0 · MIT-0
cross-platform ✓ 安全检测通过
121
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当前安装
1
版本数
在 OpenClaw 中安装
/install pseudotime-trajectory-viz
功能描述
Analyze data with `pseudotime-trajectory-viz` using a reproducible workflow, explicit validation, and structured outputs for review-ready interpretation.
安全使用建议
This package appears coherent for pseudotime analysis, but because source/homepage are unknown, do the following before trusting it with sensitive data: (1) run the recommended smoke check: python -m py_compile scripts/main.py; (2) inspect scripts/main.py locally (it is included) and run it on a small synthetic or non-sensitive AnnData file to verify behavior and outputs; (3) install dependencies in an isolated virtual environment (venv/conda) to avoid contaminating your system Python; (4) confirm there are no unexpected network calls during execution (e.g., run in an offline or sandboxed environment or monitor network activity); (5) pin dependency versions if you will use it in production and review the provenance/license since repository/homepage is not provided.
功能分析
Type: OpenClaw Skill Name: pseudotime-trajectory-viz Version: 1.0.0 The skill bundle provides a legitimate tool for single-cell RNA-seq trajectory analysis and visualization. The core logic in `scripts/main.py` utilizes standard scientific libraries (scanpy, anndata, matplotlib) to perform diffusion pseudotime and PAGA analysis. The instructions in `SKILL.md` are well-structured, emphasizing input validation, reproducible workflows, and security best practices without any evidence of prompt injection or malicious intent. No suspicious behaviors such as data exfiltration, unauthorized file access, or remote code execution were found.
能力评估
Purpose & Capability
Name/description, SKILL.md, README, requirements.txt and scripts/main.py all align: they implement single-cell pseudotime inference and visualization using scanpy/anndata and related libraries. Required packages are appropriate for the stated functionality and there are no unrelated binaries, credentials, or config paths requested.
Instruction Scope
Runtime instructions are narrowly scoped: validate inputs, run a non-destructive smoke check (python -m py_compile scripts/main.py), and execute scripts/main.py with the user-supplied AnnData file. Instructions do not ask the agent to read unrelated system files, environment secrets, or to transmit data to external endpoints.
Install Mechanism
No install spec is provided (instruction-only with included script). Dependencies are listed in requirements.txt for pip; there are no downloads from arbitrary URLs or archive extraction steps in the manifest. This is a low-risk install posture, though installing Python scientific packages can pull many transitive dependencies (expected for this domain).
Credentials
The skill declares no environment variables, no credentials, and no config paths. The code operates on user-specified input files and local outputs only. There are no requested secrets or unrelated environment access.
Persistence & Privilege
always:false (default) and the skill does not request persistent system-wide changes. The skill can be invoked autonomously by an agent (disable-model-invocation:false) which is the platform default; this is not combined with any other broad privileges or secret access here.
如何使用
  1. 确保已安装 OpenClaw(本地或 Docker 部署)
  2. 在对话框中输入安装命令:/install pseudotime-trajectory-viz
  3. 安装完成后,直接呼叫该 Skill 的名称或使用 /pseudotime-trajectory-viz 触发
  4. 根据 Skill 的参数说明提供必要输入,即可获得结构化输出
版本历史
v1.0.0
pseudotime-trajectory-viz 1.0.0 - Initial release with structured, reproducible workflow for visualizing single-cell developmental trajectories. - Supports pseudotime analysis, lineage inference, and overlay of gene expression dynamics on trajectory plots. - Provides explicit input validation, fallback handling, and output discipline for review-ready results. - Accepts AnnData (.h5ad) files and outputs trajectory visualizations, pseudotime statistics, and detailed reports. - Includes audit-ready commands and configurable analysis via command-line parameters.
元数据
Slug pseudotime-trajectory-viz
版本 1.0.0
许可证 MIT-0
累计安装 0
当前安装数 0
历史版本数 1
常见问题

Pseudotime Trajectory Viz 是什么?

Analyze data with `pseudotime-trajectory-viz` using a reproducible workflow, explicit validation, and structured outputs for review-ready interpretation. 它是一个面向 Claude Code / OpenClaw 的 AI Agent Skill 插件,目前累计下载 121 次。

如何安装 Pseudotime Trajectory Viz?

在 OpenClaw 或 Claude Code 对话框中运行命令「/install pseudotime-trajectory-viz」即可一键安装,无需额外配置。

Pseudotime Trajectory Viz 是免费的吗?

是的,Pseudotime Trajectory Viz 完全免费,采用 MIT-0 许可证,可自由下载、安装和使用。

Pseudotime Trajectory Viz 支持哪些平台?

Pseudotime Trajectory Viz 跨平台运行,可在任意部署了 OpenClaw / Claude Code 的环境中使用(cross-platform)。

谁开发了 Pseudotime Trajectory Viz?

由 AIpoch(@aipoch-ai)开发并维护,当前版本 v1.0.0。

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