Motif Logo Generator

Generate publication-quality sequence logos for DNA or protein motifs.

This package is not clearly malicious, but it is inconsistent and needs manual review before use. Things to do before running or installing: 1) Inspect scripts/main.py (already included) — it looks benign (file I/O, local computation, prints commands), but confirm it matches your expectations. 2) Don't trust SKILL.md blindly: it advertises CLI flags and a Python API that aren't implemented and lists extra dependencies (logomaker, pandas, matplotlib) that aren't in requirements.txt. 3) Run python -m py_compile scripts/main.py and run the script in a sandboxed environment (or container/VM) with a non-sensitive sample input first. 4) If you need the extra features mentioned in SKILL.md (plotting, PNG/PDF output via libraries), request or add the missing implementation and update requirements.txt accordingly; otherwise remove misleading docs. 5) Be cautious about executing the printed weblogo shell commands — they assume an external tool (weblogo) is installed and could be used to execute further commands on your system. 6) If you want to allow an agent to run this skill autonomously, fix the documentation/implementation mismatch and pin exact dependencies; otherwise, treat it as an untrusted, locally-run script. If you want, I can produce a checklist of exact changes to make SKILL.md and the code consistent.

Type: OpenClaw Skill Name: motif-logo-generator Version: 1.0.0 The skill is a functional but basic tool for generating sequence motif logos. While there are minor inconsistencies between the documentation (SKILL.md) and the implementation (scripts/main.py)—such as missing dependencies in requirements.txt and mismatched CLI arguments—the code itself is harmless. It performs local data processing and text generation (ASCII or shell command templates) without any signs of data exfiltration, unauthorized execution, or persistence mechanisms.