Sc-RNA Cell Type Annotator

Auto-annotate cell clusters from single-cell RNA data using marker genes.

This package appears non-malicious but incomplete or inconsistent. Before installing or using it: (1) Inspect and run the script in a sandboxed environment (python -m py_compile scripts/main.py; python scripts/main.py --demo) to confirm behavior. (2) Note that --markers is accepted by the CLI but not implemented — expect to add CSV parsing and input validation if you need real-file support. (3) Verify any future changes properly sanitize input paths (prevent ../ traversal) and explicitly write outputs to a workspace directory. (4) Consider contacting the author/source (unknown here) or prefer a vetted tool if you need production annotation pipelines. If you decide to extend this skill yourself, add robust file I/O, path sanitization, and unit tests; keep execution confined to a safe environment while developing.

Type: OpenClaw Skill Name: scrna-cell-type-annotator Version: 1.0.0 The skill is a straightforward tool for biological data analysis, specifically for annotating cell types in scRNA-seq data. The Python script `scripts/main.py` contains simple scoring logic using a hardcoded marker database and lacks any network calls, shell execution, or sensitive file access. The `SKILL.md` instructions are consistent with the code's functionality and do not contain any prompt injection attempts or malicious directives.