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Install in OpenClaw
/install unstructured-medical-text-miner
Description
Mine unstructured clinical text from MIMIC-IV to extract diagnostic logic.
Usage Guidance
This skill appears coherent for local analysis of MIMIC‑IV notes. Before installing/running: (1) confirm you have lawful access to MIMIC‑IV and follow your institution's PHI handling rules; (2) review scripts/main.py and any export functions to ensure outputs are written to secure locations and not transmitted externally; (3) install recommended Python packages and the required spaCy/scispaCy models in an isolated environment (virtualenv or container) and be prepared for large model downloads; (4) test on synthetic or fully deidentified data first; (5) if you need to run in a shared environment, restrict file permissions and logs so patient data cannot leak. If you want, I can list specific lines in scripts/main.py that write files or otherwise persist output so you can inspect them more closely.
Capability Analysis
Type: OpenClaw Skill
Name: unstructured-medical-text-miner
Version: 1.0.0
The skill bundle is a legitimate medical text mining tool designed to extract clinical insights from the MIMIC-IV dataset. The code in scripts/main.py uses standard NLP libraries (spaCy, scispacy) and regular expressions for entity recognition and relationship extraction, with no evidence of network activity, shell execution, or unauthorized data exfiltration. The instructions in SKILL.md are strictly aligned with the stated purpose and do not contain any prompt-injection attempts to hijack the agent's behavior.
Capability Assessment
Purpose & Capability
Name/description match the included code and SKILL.md. The package contains Python scripts that implement regex- and spaCy-based entity/relation extraction and timeline logic consistent with extracting diagnostic logic from MIMIC‑IV text. Declared NLP dependencies (spacy, scispacy, negspacy, pandas, etc.) are proportionate to the task.
Instruction Scope
SKILL.md instructs local execution of scripts (python -m py_compile, python scripts/main.py) and to provide MIMIC‑IV note files; it does not instruct reading unrelated system files or contacting external endpoints. Caution: the skill expects you to edit/configure parameters (in-file CONFIG) and will read/process sensitive clinical text. Review export/save logic (e.g., export_to_json) to ensure no unintended disclosure.
Install Mechanism
There is no automated install spec; the repo includes requirements.txt listing standard Python/NLP packages. No arbitrary remote download URLs or archive extraction were found. Note that scispacy/spacy models (e.g., en_core_sci_lg) may require additional model downloads and substantial disk/IO/network when installed.
Credentials
The skill requests no environment variables, credentials, or config paths. This is proportionate for a local data‑processing NLP tool. Important: although it doesn't request secrets, it is designed to process highly sensitive MIMIC‑IV data (PHI), so data governance and access controls are required before use.
Persistence & Privilege
always is false and there is no indication the skill modifies other skills or system-wide agent settings. The default ability for an agent to invoke skills autonomously is present but not combined with other concerning flags.
How to Use
- Make sure OpenClaw is installed (local or Docker)
- Run the install command in chat:
/install unstructured-medical-text-miner - After installation, invoke the skill by name or use
/unstructured-medical-text-miner - Provide required inputs per the skill's parameter spec and get structured output
Version History
v1.0.0
Unstructured Medical Text Miner 1.0.0 – Initial Release
- Provides a toolchain for mining unstructured clinical text from MIMIC-IV.
- Extracts diagnostic logic, clinical entities, relationships, timelines, and treatment reasoning from notes.
- Supports FHIR-compatible, knowledge graph, and temporal output formats.
- Includes negation detection and structured error handling/fallback paths.
- Command-line and Python API usage examples provided for easy integration.
Metadata
Frequently Asked Questions
What is Unstructured Medical Text Miner?
Mine unstructured clinical text from MIMIC-IV to extract diagnostic logic. It is an AI Agent Skill for Claude Code / OpenClaw, with 152 downloads so far.
How do I install Unstructured Medical Text Miner?
Run "/install unstructured-medical-text-miner" in the OpenClaw or Claude Code chat to install it in one step — no extra setup required.
Is Unstructured Medical Text Miner free?
Yes, Unstructured Medical Text Miner is completely free, licensed under MIT-0. You can download, install and use it at no cost.
Which platforms does Unstructured Medical Text Miner support?
Unstructured Medical Text Miner is cross-platform and runs anywhere OpenClaw / Claude Code is available (cross-platform).
Who created Unstructured Medical Text Miner?
It is built and maintained by AIpoch (@aipoch-ai); the current version is v1.0.0.
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