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aipoch-ai

Sanger Chromatogram QA

by AIpoch · GitHub ↗ · v1.0.0 · MIT-0
cross-platform ⚠ suspicious
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Install in OpenClaw
/install sanger-chromatogram-qa
Description
Use sanger chromatogram qa for data analysis workflows that need structured execution, explicit assumptions, and clear output boundaries.
Usage Guidance
This skill is coherent at a high level (Sanger QA + numpy + a script) but the implementation is incomplete and partly placeholder. Before installing or running: 1) Inspect scripts/main.py — it currently only implements a demo and does not parse AB1 files or perform mixed-signal detection. 2) Run python -m py_compile and python scripts/main.py --demo in an isolated/sandboxed environment to confirm behavior. 3) Do not run the script against sensitive data until it has proper AB1 parsing and input validation; add or verify input sanitization and path traversal protections if you or the integrator extend the script to accept file paths. 4) If you expect full QA functionality, request or implement the missing features (AB1 parsing, mixed-signal detection, configuration block, robust error handling) and an updated dependency list (e.g., biopython or abifpy) before trusting outputs. 5) If you need help assessing any code changes, have a developer or security reviewer audit the modifications.
Capability Analysis
Type: OpenClaw Skill Name: sanger-chromatogram-qa Version: 1.0.0 The skill bundle is a legitimate, albeit early-stage (draft), tool for Sanger sequencing quality assessment. The Python script (scripts/main.py) contains basic logic for calculating quality scores and identifying mutations using numpy, with no evidence of data exfiltration, malicious execution, or obfuscation. The SKILL.md instructions focus on structured execution and safety boundaries without any prompt-injection attempts.
Capability Assessment
Purpose & Capability
The name, description, and declared dependency on numpy align with a lightweight Sanger QA tool. However, the packaged script is a minimal demo: it does not parse AB1 files, detect mixed signals (detect_mixed_signals returns 0), or implement a CONFIG block the README references. The required files and dependency list are proportionate, but the implementation is incomplete relative to the stated purpose.
Instruction Scope
SKILL.md instructs operators to run and validate scripts against real inputs, mentions editing an in-file CONFIG block, and promises input validation and bounded outputs. The shipped script only prints a demo report when run with --demo and otherwise tells the user to use --demo; it has no AB1 parsing, no file I/O, and no explicit input validation. This mismatch means following the instructions will not produce the claimed behavior and could mislead users into thinking a full QA tool is present when it is not.
Install Mechanism
There is no install spec (instruction-only skill) and the included requirements.txt lists only numpy. Nothing is downloaded from external URLs and no archive extraction is required. Risk from the install mechanism is low — the only code written to disk is the repository files already present.
Credentials
The skill requests no environment variables, no credentials, and no config paths. That is proportionate to the claimed functionality.
Persistence & Privilege
The skill does not request always:true or attempt to modify other skills or global agent settings. It is user-invocable and can be run locally on demand; this level of privilege is appropriate.
How to Use
  1. Make sure OpenClaw is installed (local or Docker)
  2. Run the install command in chat: /install sanger-chromatogram-qa
  3. After installation, invoke the skill by name or use /sanger-chromatogram-qa
  4. Provide required inputs per the skill's parameter spec and get structured output
Version History
v1.0.0
- Initial release of the sanger-chromatogram-qa skill for Sanger sequencing data QA workflows. - Provides a structured, auditable execution path with clear input validation and error handling. - Supports mutation verification, clone confirmation, genotyping QC, and SNP validation using packaged Python scripts. - Emphasizes explicit assumptions, clear boundaries, and reproducible, reviewable outputs. - Includes risk assessment, security checklists, and example usage instructions for streamlined onboarding.
Metadata
Slug sanger-chromatogram-qa
Version 1.0.0
License MIT-0
All-time Installs 0
Active Installs 0
Total Versions 1
Frequently Asked Questions

What is Sanger Chromatogram QA?

Use sanger chromatogram qa for data analysis workflows that need structured execution, explicit assumptions, and clear output boundaries. It is an AI Agent Skill for Claude Code / OpenClaw, with 102 downloads so far.

How do I install Sanger Chromatogram QA?

Run "/install sanger-chromatogram-qa" in the OpenClaw or Claude Code chat to install it in one step — no extra setup required.

Is Sanger Chromatogram QA free?

Yes, Sanger Chromatogram QA is completely free, licensed under MIT-0. You can download, install and use it at no cost.

Which platforms does Sanger Chromatogram QA support?

Sanger Chromatogram QA is cross-platform and runs anywhere OpenClaw / Claude Code is available (cross-platform).

Who created Sanger Chromatogram QA?

It is built and maintained by AIpoch (@aipoch-ai); the current version is v1.0.0.

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